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Ponciano, J.M., F. P.J. Vandecasteele, T.F.
Hess, L.J. Forney, R.L. Crawford, and P. Joyce. 2005.
Use of stochastic
models to assess the effect of environmental factors on microbial growth. Appl. Environ. Microbiol. 71:2355-2364.
Noguez, A. M., H. T. Arita, A. E. Escalante, L. J. Forney, F. García-Oliva, and V. Souza. 2005.
Microbial macroecology: Highly structured
prokaryotic soil assemblages in a tropical deciduous forest. Global Ecology
and Biogeography 14:241-248.
Joyce,
P., Z. Abdo, J. Ponciano, L. De Gelder, L. Forney, and E. M. Top. 2005.
Modeling the impact of periodic bottlenecks, unidirectional mutation and
observational error in experimental evolution. J. Math. Biol. 50:
645–662.
De Gelder, L.,
F. P. J. Vandecasteele, C. J. Brown, L. J. Forney, and E. M. Top. 2005.
Plasmid donor affects host range of the promiscuous IncP-1ß plasmid pB10 in
a sewage sludge microbial community. Appl. Environ. Microbiol. 71.
De Gelder, L., J. M. Ponciano, Z. Abdo, P. Joyce, L. J.
Forney, E. M. Top. 2004.
Combining mathematical models and statistical
methods to understand and predict the dynamics of antibiotic sensitive
mutants in a population of resistant bacteria during experimental evolution.
Genetics 168: 1131-1144.
Zhou, X., S.J. Bent, M.G. Schneider, C.C. Davis, M.R. Islam,
L.J. Forney. 2004.
Characterization of vaginal microbial communities in
adult healthy women as determined by sequencing clones and terminal
restriction fragment length polymorphism (T-RFLP) analyses. Microbiology
150: 2565–2573.
Forney, L.J., X. Zhou, C.J. Brown. 2004.
Molecular microbial
ecology: land of the one-eyed king. Curr. Opin. Microbiol. 7:210–220.
Werne, J.P., R.R. Haese, T. Zitter, G. Aloisi, I. Bouloubassi,
S. Heijs, A.F. Medioni, R.D. Pancost, J.S. Damste, G. de Lange, LJ. Forney,
J.C. Gottschalf, J-P. Foucher, J. Mascle, J. Woodside, the MEDINAUT and
MEDINETH Shipboard Scientific Parties. (2004).
Life at cold seeps: a
synthesis of biogeochemical and ecological data from Kazan mud volcano,
eastern Mediterranean Sea. Chemical Geology 205:67–390.
Oda, Y. W.G. Meijer, J.L. Gibson, J.C. Gottschal, and L.J.
Forney. 2004. Analysis of diversity among 3-chlorobenzoate-degrading strains
of Rhodopseudomonas palustris. Microbial Ecology 47: 68 - 79.
Schlüter, A., H. Heuer, R. Szczepanowski, L.J. Forney, C.M.
Thomas, A. Pühler and E.M. Top. 2003.
The 64,508 bp IncP-b antibiotic
multiresistance plasmid pB10 isolated from a wastewater treatment plant
provides evidence for recombination between members of different branches of
the IncP-1ß group. Microbiology 149: 3139-3153.
Bent S.J., C.L. Gucker, Y. Oda, L.J. Forney. 2003.
Spatial
distribution of Rhodopseudomonas palustris ecotypes on a local scale.
Appl. Environ. Microbiol. 69: 5192-5197.
Oda, Y., B. Star, L.A. Huisman, J.C. Gottschal, and L.J.
Forney. 2003.
Biogeography of the purple nonsulfur bacterium
Rhodopseudomonas palustris. Appl. Environ. Microbiol. 69: 5186-5191.
Oda, Y., W. Wanders, L.A. Huisman, W.G. Huisman, W.G. Meijer,
J.C. Meijer, J.C. Gottschal, and L.J. Forney. 2002.
Genotypic and phenotypic
diversity within species of purple nonsulfur bacteria isolated from aquatic
sediments. Appl. Environ. Microbiol. 68:3467-3477.
Oda, Y., Y.P. de Vries, L.J. Forney, and J.C. Gottschal,
2001. Acquisition of the ability for Rhodopseudomonas palustris to degrade
chlorinated benzoic acids as the sole carbon source. FEMS Microbiol. Ecol.
38:133-139.
Tauch A., S. Schneiker, W. Selbitschka, A. Pühler, L. S. van
Overbeek, K. Smalla, C. M. Thomas, M. J. Bailey, L.J. Forney, A. Weightman,
P. Ceglowski, T. Pembroke, E. Tietze, G. Schröder, E. Lanka, and J. D. van
Elsas. 2002. The complete nucleotide sequence and environmental distribution
of the cryptic, conjugative, broad-host-range plasmid pIPO2 isolated from
bacteria of the wheat rhizosphere. Microbiology 148:1637-1653.
Riley, M.S., V.S. Cooper, R.E. Lenski, L.J. Forney, and T.L.
Marsh 2000. Rapid phenotypic radiation of a soil bacterium during
experimental evolution for 1000 generations. Microbiology 147:995-1006.
Nakatsu, C.H., R. Korona, R.E. Lenski, F.J. de Bruijn, T.L.
Marsh and L.J. Forney 1998.
Genomic rearrangements observed in Ralstonia sp.
during experimental evolution. J. Bacteriol. 180:4325-4331.
Liu, W-T., T.L. Marsh, L.J. Forney. 1997.
Characterization
of microbial diversity by determining terminal restriction fragment length
polymorphisms of genes encoding 16S rDNA. Appl. Environ. Microbiol.
63:4516-4522.
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