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codon
A codon is a sequence of three
bases in RNA. Each codon specifies one amino acid. For example,
the RNA sequence UUUAAACCC specifies three codons (UUU-AAA-CCC), which each
specify one amino acid. This RNA sequence, then, encodes a protein sequence
three amino acids in length (as we will see, it encodes
Phenylalanine-Lysine-Proline). There are sixty-four possible codons.
Nearly all living things use the same genetic code. The standard version is
given in the following tables, which show what amino acid each of the 43
= 64 possible codons specify (Table 1), and what codons specify each of the 20
amino acids involved in translation. For instance, GAU codes for the amino
acid Asp (asparagine), and Cys (cysteine) is coded for by the codons UGU and UGC.
The bases in the table below are adenine, cytosine, guanine and uracil, which
are used in the mRNA; in the DNA, thymine takes the place of uracil.
Table 1 : Codon table. This table illustrates the 64
possible codon triplets.
| |
2nd base |
| U |
C |
A |
G |
| 1st base |
U |
UUU Phenylalanine
UUC Phenylalanine
UUA Leucine
UUG Leucine
|
UCU Serine
UCC Serine
UCA Serine
UCG Serine
|
UAU Tyrosine
UAC Tyrosine
UAA Ochre Stop
UAG Amber Stop
|
UGU Cysteine
UGC Cysteine
UGA Opal Stop
UGG Tryptophan
|
| C |
CUU Leucine
CUC Leucine
CUA Leucine
CUG Leucine
|
CCU Proline
CCC Proline
CCA Proline
CCG Proline
|
CAU Histidine
CAC Histidine
CAA Glutamine
CAG Glutamine
|
CGU Arginine
CGC Arginine
CGA Arginine
CGG Arginine
|
| A |
AUU Isoleucine
AUC Isoleucine
AUA Isoleucine
1AUG Methionine
|
ACU Threonine
ACC Threonine
ACA Threonine
ACG Threonine
|
AAU Asparagine
AAC Asparagine
AAA Lysine
AAG Lysine
|
AGU Serine
AGC Serine
AGA Arginine
AGG Arginine
|
| G |
GUU Valine
GUC Valine
GUA Valine
GUG Valine
|
GCU Alanine
GCC Alanine
GCA Alanine
GCG Alanine
|
GAU Aspartic acid
GAC Aspartic acid
GAA Glutamic acid
GAG Glutamic acid
|
GGU Glycine
GGC Glycine
GGA Glycine
GGG Glycine
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1The AUG codon both codes for methionine and serves as an
initiation site; the first AUG in an mRNA's coding region will be the site where
translation into protein begins.
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